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NonDAdaptImpSampling Class Reference

Class for the Adaptive Importance Sampling methods within DAKOTA. More...

Inheritance diagram for NonDAdaptImpSampling:
NonDSampling NonD Analyzer Iterator

Public Member Functions

 NonDAdaptImpSampling (ProblemDescDB &problem_db, Model &model)
 standard constructor More...
 
 NonDAdaptImpSampling (Model &model, unsigned short sample_type, int samples, int seed, const String &rng, bool vary_pattern, unsigned short is_type, bool cdf_flag, bool x_space_model, bool use_model_bounds, bool track_extreme)
 alternate constructor for on-the-fly instantiations More...
 
 ~NonDAdaptImpSampling ()
 destructor
 
bool resize ()
 reinitializes iterator based on new variable size
 
void derived_init_communicators (ParLevLIter pl_iter)
 derived class contributions to initializing the communicators associated with this Iterator instance
 
void derived_set_communicators (ParLevLIter pl_iter)
 derived class contributions to setting the communicators associated with this Iterator instance
 
void derived_free_communicators (ParLevLIter pl_iter)
 derived class contributions to freeing the communicators associated with this Iterator instance
 
void nested_variable_mappings (const SizetArray &c_index1, const SizetArray &di_index1, const SizetArray &ds_index1, const SizetArray &dr_index1, const ShortArray &c_target2, const ShortArray &di_target2, const ShortArray &ds_target2, const ShortArray &dr_target2)
 set primaryA{CV,DIV,DRV}MapIndices, secondaryA{CV,DIV,DRV}MapTargets within derived Iterators; supports computation of higher-level sensitivities in nested contexts (e.g., derivatives of statistics w.r.t. inserted design variables)
 
void core_run ()
 performs adaptive importance sampling and computes probability of failure
 
void print_results (std::ostream &s, short results_state=FINAL_RESULTS)
 print the final statistics
 
unsigned short sampling_scheme () const
 return importanceSamplingType
 
int refinement_samples () const
 return refineSamples
 
void initialize (const RealVectorArray &full_points, bool x_space_data, size_t resp_index, Real initial_prob, Real failure_threshold)
 initializes data needed for importance sampling: an initial set of points around which to sample, a failure threshold, an initial probability to refine, and flags to control transformations More...
 
void initialize (const RealMatrix &full_points, bool x_space_data, size_t resp_index, Real initial_prob, Real failure_threshold)
 initializes data needed for importance sampling: an initial set of points around which to sample, a failure threshold, an initial probability to refine, and flags to control transformations More...
 
void initialize (const RealVector &full_point, bool x_space_data, size_t resp_index, Real initial_prob, Real failure_threshold)
 initializes data needed for importance sampling: an initial point around which to sample, a failure threshold, an initial probability to refine, and flags to control transformations More...
 
Real final_probability ()
 returns the final probability calculated by the importance sampling
 
const RealRealPairArray & extreme_values () const
 return extremeValues
 
- Public Member Functions inherited from NonDSampling
 NonDSampling (Model &model, const RealMatrix &sample_matrix)
 alternate constructor for evaluating and computing statistics for the provided set of samples More...
 
 ~NonDSampling ()
 destructor
 
void compute_statistics (const RealMatrix &vars_samples, const IntResponseMap &resp_samples)
 For the input sample set, computes mean, standard deviation, and probability/reliability/response levels (aleatory uncertainties) or intervals (epsitemic or mixed uncertainties)
 
void compute_intervals (RealRealPairArray &extreme_fns)
 called by compute_statistics() to calculate min/max intervals using allResponses
 
void compute_intervals (const IntResponseMap &samples)
 called by compute_statistics() to calculate extremeValues from samples
 
void compute_intervals (RealRealPairArray &extreme_fns, const IntResponseMap &samples)
 called by compute_statistics() to calculate min/max intervals using samples
 
void compute_moments (const RealVectorArray &fn_samples)
 calculates sample moments from a matrix of observations for a set of QoI
 
void compute_moments (const IntResponseMap &samples)
 calculate sample moments and confidence intervals from a map of response observations
 
void compute_moments (const IntResponseMap &samples, RealMatrix &moment_stats, RealMatrix &moment_grads, RealMatrix &moment_conf_ints, short moments_type, const StringArray &labels)
 convert IntResponseMap to RealVectorArray and invoke helpers
 
void compute_moment_gradients (const RealVectorArray &fn_samples, const RealMatrixArray &grad_samples, const RealMatrix &moment_stats, RealMatrix &moment_grads, short moments_type)
 compute moment_grads from function and gradient samples
 
void compute_moment_confidence_intervals (const RealMatrix &moment_stats, RealMatrix &moment_conf_ints, const SizetArray &sample_counts, short moments_type)
 compute moment confidence intervals from moment values
 
void archive_moments (size_t inc_id=0)
 archive moment statistics in results DB
 
void archive_moment_confidence_intervals (size_t inc_id=0)
 archive moment confidence intervals in results DB
 
void archive_extreme_responses (size_t inc_id=0)
 archive extreme values (epistemic result) in results DB
 
void compute_level_mappings (const IntResponseMap &samples)
 called by compute_statistics() to calculate CDF/CCDF mappings of z to p/beta and of p/beta to z as well as PDFs More...
 
void print_statistics (std::ostream &s) const
 prints the statistics computed in compute_statistics()
 
void print_intervals (std::ostream &s) const
 prints the intervals computed in compute_intervals() with default qoi_type and moment_labels
 
void print_intervals (std::ostream &s, String qoi_type, const StringArray &interval_labels) const
 prints the intervals computed in compute_intervals()
 
void print_moments (std::ostream &s) const
 prints the moments computed in compute_moments() with default qoi_type and moment_labels
 
void print_moments (std::ostream &s, String qoi_type, const StringArray &moment_labels) const
 prints the moments computed in compute_moments()
 
void print_wilks_stastics (std::ostream &s) const
 prints the Wilks stastics
 
void update_final_statistics ()
 update finalStatistics from minValues/maxValues, momentStats, and computedProbLevels/computedRelLevels/computedRespLevels
 
void transform_samples (Pecos::ProbabilityTransformation &nataf, bool x_to_u=true)
 transform allSamples imported by alternate constructor. This is needed since random variable distribution parameters are not updated until run time and an imported sample_matrix is typically in x-space. More...
 
void transform_samples (Pecos::ProbabilityTransformation &nataf, RealMatrix &sample_matrix, int num_samples=0, bool x_to_u=true)
 transform the specified samples matrix from x to u or u to x
 
unsigned short sampling_scheme () const
 return sampleType
 
const String & random_number_generator () const
 return rngName
 
- Public Member Functions inherited from NonD
void requested_levels (const RealVectorArray &req_resp_levels, const RealVectorArray &req_prob_levels, const RealVectorArray &req_rel_levels, const RealVectorArray &req_gen_rel_levels, short resp_lev_tgt, short resp_lev_tgt_reduce, bool cdf_flag, bool pdf_output)
 set requestedRespLevels, requestedProbLevels, requestedRelLevels, requestedGenRelLevels, respLevelTarget, cdfFlag, and pdfOutput (used in combination with alternate ctors)
 
void print_level_mappings (std::ostream &s) const
 prints the z/p/beta/beta* mappings reflected in {requested,computed}{Resp,Prob,Rel,GenRel}Levels for default qoi_type and qoi_labels
 
void print_level_mappings (std::ostream &s, String qoi_type, const StringArray &qoi_labels) const
 prints the z/p/beta/beta* mappings reflected in {requested,computed}{Resp,Prob,Rel,GenRel}Levels More...
 
void print_level_mappings (std::ostream &s, const RealVector &level_maps, bool moment_offset, const String &prepend="")
 print level mapping statistics using optional pre-pend More...
 
bool pdf_output () const
 get pdfOutput
 
void pdf_output (bool output)
 set pdfOutput
 
short final_moments_type () const
 get finalMomentsType
 
void final_moments_type (short type)
 set finalMomentsType
 
- Public Member Functions inherited from Analyzer
const VariablesArray & all_variables ()
 return the complete set of evaluated variables
 
const RealMatrix & all_samples ()
 return the complete set of evaluated samples
 
const IntResponseMap & all_responses () const
 return the complete set of computed responses
 
- Public Member Functions inherited from Iterator
 Iterator (std::shared_ptr< TraitsBase > traits=std::shared_ptr< TraitsBase >(new TraitsBase()))
 default constructor More...
 
 Iterator (ProblemDescDB &problem_db, std::shared_ptr< TraitsBase > traits=std::shared_ptr< TraitsBase >(new TraitsBase()))
 alternate envelope constructor that assigns a representation pointer More...
 
 Iterator (ProblemDescDB &problem_db, Model &model, std::shared_ptr< TraitsBase > traits=std::shared_ptr< TraitsBase >(new TraitsBase()))
 alternate envelope constructor which uses the ProblemDescDB but accepts a model from a higher level (meta-iterator) context, instead of constructing its own More...
 
 Iterator (const String &method_string, Model &model, std::shared_ptr< TraitsBase > traits=std::shared_ptr< TraitsBase >(new TraitsBase()))
 alternate envelope constructor for instantiations by name without the ProblemDescDB More...
 
 Iterator (const Iterator &iterator)
 copy constructor More...
 
virtual ~Iterator ()
 destructor
 
Iterator operator= (const Iterator &iterator)
 assignment operator
 
virtual void post_input ()
 read tabular data for post-run mode
 
virtual void reset ()
 restore initial state for repeated sub-iterator executions
 
virtual void nested_response_mappings (const RealMatrix &primary_coeffs, const RealMatrix &secondary_coeffs)
 set primaryResponseCoefficients, secondaryResponseCoefficients within derived Iterators; Necessary for scalarization case in MLMC NonDMultilevelSampling to map scalarization in nested context
 
virtual void initialize_iterator (int job_index)
 used by IteratorScheduler to set the starting data for a run
 
virtual void pack_parameters_buffer (MPIPackBuffer &send_buffer, int job_index)
 used by IteratorScheduler to pack starting data for an iterator run
 
virtual void unpack_parameters_buffer (MPIUnpackBuffer &recv_buffer, int job_index)
 used by IteratorScheduler to unpack starting data for an iterator run
 
virtual void unpack_parameters_initialize (MPIUnpackBuffer &recv_buffer, int job_index)
 used by IteratorScheduler to unpack starting data and initialize an iterator run
 
virtual void pack_results_buffer (MPIPackBuffer &send_buffer, int job_index)
 used by IteratorScheduler to pack results data from an iterator run
 
virtual void unpack_results_buffer (MPIUnpackBuffer &recv_buffer, int job_index)
 used by IteratorScheduler to unpack results data from an iterator run
 
virtual void update_local_results (int job_index)
 used by IteratorScheduler to update local results arrays
 
virtual bool accepts_multiple_points () const
 indicates if this iterator accepts multiple initial points. Default return is false. Override to return true if appropriate.
 
virtual void initial_point (const Variables &pt)
 sets the initial point for this iterator (user-functions mode for which Model updating is not used)
 
virtual void initial_point (const RealVector &pt)
 sets the initial point (active continuous variables) for this iterator (user-functions mode for which Model updating is not used)
 
virtual void initial_points (const VariablesArray &pts)
 sets the multiple initial points for this iterator. This should only be used if accepts_multiple_points() returns true.
 
virtual void variable_bounds (const RealVector &cv_lower_bnds, const RealVector &cv_upper_bnds)
 assign nonlinear inequality and equality constraint allowables for this iterator (user-functions mode for which Model updating is not used)
 
virtual void linear_constraints (const RealMatrix &lin_ineq_coeffs, const RealVector &lin_ineq_lb, const RealVector &lin_ineq_ub, const RealMatrix &lin_eq_coeffs, const RealVector &lin_eq_tgt)
 assign linear inequality and linear equality constraints for this iterator (user-functions mode for which Model updating is not used)
 
virtual void nonlinear_constraints (const RealVector &nln_ineq_lb, const RealVector &nln_ineq_ub, const RealVector &nln_eq_tgt)
 assign nonlinear inequality and equality constraint allowables for this iterator (user-functions mode for which Model updating is not used)
 
virtual void initialize_graphics (int iterator_server_id=1)
 initialize the 2D graphics window and the tabular graphics data More...
 
virtual unsigned short uses_method () const
 return name of any enabling iterator used by this iterator More...
 
virtual void method_recourse ()
 perform a method switch, if possible, due to a detected conflict
 
virtual void sampling_increment ()
 increment to next in sequence of refinement samples
 
virtual IntIntPair estimate_partition_bounds ()
 estimate the minimum and maximum partition sizes that can be utilized by this Iterator
 
virtual void declare_sources ()
 Declare sources to the evaluations database.
 
void init_communicators (ParLevLIter pl_iter)
 initialize the communicators associated with this Iterator instance
 
void set_communicators (ParLevLIter pl_iter)
 set the communicators associated with this Iterator instance
 
void free_communicators (ParLevLIter pl_iter)
 free the communicators associated with this Iterator instance
 
void resize_communicators (ParLevLIter pl_iter, bool reinit_comms)
 Resize the communicators. This is called from the letter's resize()
 
void parallel_configuration_iterator (ParConfigLIter pc_iter)
 set methodPCIter
 
ParConfigLIter parallel_configuration_iterator () const
 return methodPCIter
 
void run (ParLevLIter pl_iter)
 invoke set_communicators(pl_iter) prior to run()
 
void run ()
 orchestrate initialize/pre/core/post/finalize phases More...
 
void assign_rep (std::shared_ptr< Iterator > iterator_rep)
 replaces existing letter with a new one More...
 
void iterated_model (const Model &model)
 set the iteratedModel (iterators and meta-iterators using a single model instance)
 
Modeliterated_model ()
 return the iteratedModel (iterators & meta-iterators using a single model instance)
 
ProblemDescDBproblem_description_db () const
 return the problem description database (probDescDB)
 
ParallelLibraryparallel_library () const
 return the parallel library (parallelLib)
 
void method_name (unsigned short m_name)
 set the method name to an enumeration value
 
unsigned short method_name () const
 return the method name via its native enumeration value
 
void method_string (const String &m_str)
 set the method name by string
 
String method_string () const
 return the method name by string
 
String method_enum_to_string (unsigned short method_enum) const
 convert a method name enumeration value to a string
 
unsigned short method_string_to_enum (const String &method_str) const
 convert a method name string to an enumeration value
 
String submethod_enum_to_string (unsigned short submethod_enum) const
 convert a sub-method name enumeration value to a string
 
const String & method_id () const
 return the method identifier (methodId)
 
int maximum_evaluation_concurrency () const
 return the maximum evaluation concurrency supported by the iterator
 
void maximum_evaluation_concurrency (int max_conc)
 set the maximum evaluation concurrency supported by the iterator
 
size_t maximum_iterations () const
 return the maximum iterations for this iterator
 
void maximum_iterations (size_t max_iter)
 set the maximum iterations for this iterator
 
void convergence_tolerance (Real conv_tol)
 set the method convergence tolerance (convergenceTol)
 
Real convergence_tolerance () const
 return the method convergence tolerance (convergenceTol)
 
void output_level (short out_lev)
 set the method output level (outputLevel)
 
short output_level () const
 return the method output level (outputLevel)
 
void summary_output (bool summary_output_flag)
 Set summary output control; true enables evaluation/results summary.
 
size_t num_final_solutions () const
 return the number of solutions to retain in best variables/response arrays
 
void num_final_solutions (size_t num_final)
 set the number of solutions to retain in best variables/response arrays
 
void active_set (const ActiveSet &set)
 set the default active set (for use with iterators that employ evaluate_parameter_sets())
 
const ActiveSetactive_set () const
 return the default active set (used by iterators that employ evaluate_parameter_sets())
 
void active_set_request_vector (const ShortArray &asv)
 return the default active set request vector (used by iterators that employ evaluate_parameter_sets())
 
const ShortArray & active_set_request_vector () const
 return the default active set request vector (used by iterators that employ evaluate_parameter_sets())
 
void active_set_request_values (short asv_val)
 return the default active set request vector (used by iterators that employ evaluate_parameter_sets())
 
void sub_iterator_flag (bool si_flag)
 set subIteratorFlag (and update summaryOutputFlag if needed)
 
bool is_null () const
 function to check iteratorRep (does this envelope contain a letter?)
 
std::shared_ptr< Iteratoriterator_rep () const
 returns iteratorRep for access to derived class member functions that are not mapped to the top Iterator level
 
virtual void eval_tag_prefix (const String &eval_id_str)
 set the hierarchical eval ID tag prefix More...
 
std::shared_ptr< TraitsBasetraits () const
 returns methodTraits for access to derived class member functions that are not mapped to the top TraitsBase level
 
bool top_level ()
 Return whether the iterator is the top level iterator.
 
void top_level (const bool &tflag)
 Set the iterator's top level flag.
 

Private Member Functions

void select_rep_points (const RealVectorArray &var_samples_u, const RealVector &fn_samples)
 select representative points from a set of samples
 
void converge_statistics (bool cov_flag)
 iteratively generate samples and select representative points until probability and (optionally) coefficient of variation converge
 
void generate_samples (RealVectorArray &var_samples_u)
 generate a set of samples based on multimodal sampling density
 
void evaluate_samples (const RealVectorArray &var_samples_u, RealVector &fn_samples)
 evaluate the model at the sample points and store the responses
 
void calculate_statistics (const RealVectorArray &var_samples_u, const RealVector &fn_samples, size_t total_samples, Real &sum_prob, Real &prob, bool compute_cov, Real &sum_var, Real &cov)
 calculate the probability of exceeding the failure threshold and the coefficent of variation (if requested)
 
Real distance (const RealVector &a, const RealVector &b)
 compute Euclidean distance between points a and b
 
Real recentered_density (const RealVector &sample_point)
 compute density between a representative point and a sample point, assuming standard normal
 

Private Attributes

Model uSpaceModel
 importance sampling is performed in standardized probability space. This u-space model is either passed in (alternate constructor for helper AIS) or constructed using ProbabilityTransformModel (standard constructor for stand-alone AIS)
 
unsigned short importanceSamplingType
 integration type (is, ais, mmais) provided by input specification
 
bool initLHS
 flag to identify if initial points are generated from an LHS sample
 
bool useModelBounds
 flag to control if the sampler should respect the model bounds
 
bool invertProb
 flag for inversion of probability values using 1.-p
 
bool trackExtremeValues
 flag for tracking min/max values encountered when evaluating samples
 
int refineSamples
 size of sample batch within each refinement iteration
 
size_t respFnIndex
 the active response function index in the model to be sampled
 
RealVector designPoint
 design subset for which uncertain subset is being sampled
 
RealVectorArray initPointsU
 the original set of u-space samples passed in initialize()
 
RealVectorArray repPointsU
 the set of representative points in u-space around which to sample
 
RealVector repWeights
 the weight associated with each representative point
 
Real probEstimate
 the probability estimate that is iteratively refined by importance sampling
 
Real failThresh
 the failure threshold (z-bar) for the problem.
 

Additional Inherited Members

- Static Public Member Functions inherited from NonDSampling
static void compute_moments (const RealVectorArray &fn_samples, SizetArray &sample_counts, RealMatrix &moment_stats, short moments_type, const StringArray &labels)
 core compute_moments() implementation with all data as inputs
 
static void compute_moments (const RealVectorArray &fn_samples, RealMatrix &moment_stats, short moments_type)
 core compute_moments() implementation with all data as inputs
 
static void compute_moments (const RealMatrix &fn_samples, RealMatrix &moment_stats, short moments_type)
 alternate RealMatrix samples API for use by external clients
 
static void print_moments (std::ostream &s, const RealMatrix &moment_stats, const RealMatrix moment_cis, String qoi_type, short moments_type, const StringArray &moment_labels, bool print_cis)
 core print moments that can be called without object
 
static int compute_wilks_sample_size (unsigned short order, Real alpha, Real beta, bool twosided=false)
 calculates the number of samples using the Wilks formula Static so I can test without instantiating a NonDSampling object - RWH
 
static Real compute_wilks_residual (unsigned short order, int nsamples, Real alpha, Real beta, bool twosided)
 Helper function - calculates the Wilks residual.
 
static Real compute_wilks_alpha (unsigned short order, int nsamples, Real beta, bool twosided=false)
 calculates the alpha paramter given number of samples using the Wilks formula Static so I can test without instantiating a NonDSampling object - RWH
 
static Real compute_wilks_beta (unsigned short order, int nsamples, Real alpha, bool twosided=false)
 calculates the beta paramter given number of samples using the Wilks formula Static so I can test without instantiating a NonDSampling object - RWH
 
static Real get_wilks_alpha_min ()
 Get the lower and upper bounds supported by Wilks bisection solves.
 
static Real get_wilks_alpha_max ()
 
static Real get_wilks_beta_min ()
 
static Real get_wilks_beta_max ()
 
- Protected Member Functions inherited from NonDSampling
 NonDSampling (ProblemDescDB &problem_db, Model &model)
 constructor More...
 
 NonDSampling (unsigned short method_name, Model &model, unsigned short sample_type, int samples, int seed, const String &rng, bool vary_pattern, short sampling_vars_mode)
 alternate constructor for sample generation and evaluation "on the fly" More...
 
 NonDSampling (unsigned short sample_type, int samples, int seed, const String &rng, const RealVector &lower_bnds, const RealVector &upper_bnds)
 alternate constructor for sample generation "on the fly" More...
 
 NonDSampling (unsigned short sample_type, int samples, int seed, const String &rng, const RealVector &means, const RealVector &std_devs, const RealVector &lower_bnds, const RealVector &upper_bnds, RealSymMatrix &correl)
 alternate constructor for sample generation of correlated normals "on the fly" More...
 
void pre_run ()
 pre-run portion of run (optional); re-implemented by Iterators which can generate all Variables (parameter sets) a priori More...
 
void core_run ()
 
int num_samples () const
 
void sampling_reset (int min_samples, bool all_data_flag, bool stats_flag)
 resets number of samples and sampling flags More...
 
void sampling_reference (int samples_ref)
 set reference number of samples, which is a lower bound during reset
 
void random_seed (int seed)
 assign randomSeed
 
void vary_pattern (bool pattern_flag)
 set varyPattern
 
void get_parameter_sets (Model &model)
 Uses lhsDriver to generate a set of samples from the distributions/bounds defined in the incoming model. More...
 
void get_parameter_sets (Model &model, const int num_samples, RealMatrix &design_matrix)
 Uses lhsDriver to generate a set of samples from the distributions/bounds defined in the incoming model and populates the specified design matrix. More...
 
void get_parameter_sets (Model &model, const int num_samples, RealMatrix &design_matrix, bool write_msg)
 core of get_parameter_sets that accepts message print control
 
void get_parameter_sets (const RealVector &lower_bnds, const RealVector &upper_bnds)
 Uses lhsDriver to generate a set of uniform samples over lower_bnds/upper_bnds. More...
 
void get_parameter_sets (const RealVector &means, const RealVector &std_devs, const RealVector &lower_bnds, const RealVector &upper_bnds, RealSymMatrix &correl)
 Uses lhsDriver to generate a set of normal samples. More...
 
void update_model_from_sample (Model &model, const Real *sample_vars)
 Override default update of continuous vars only.
 
void sample_to_variables (const Real *sample_vars, Variables &vars)
 override default mapping of continuous variables only
 
void variables_to_sample (const Variables &vars, Real *sample_vars)
 override default mapping of continuous variables only
 
const RealVector & response_error_estimates () const
 return error estimates associated with each of the finalStatistics
 
void initialize_lhs (bool write_message, int num_samples)
 increments numLHSRuns, sets random seed, and initializes lhsDriver
 
void active_set_mapping ()
 in the case of sub-iteration, map from finalStatistics.active_set() requests to activeSet used in evaluate_parameter_sets() More...
 
void mode_counts (const Variables &vars, size_t &cv_start, size_t &num_cv, size_t &div_start, size_t &num_div, size_t &dsv_start, size_t &num_dsv, size_t &drv_start, size_t &num_drv) const
 compute sampled subsets (all, active, uncertain) within all variables (acv/adiv/adrv) from samplingVarsMode and model More...
 
void mode_bits (const Variables &vars, BitArray &active_vars, BitArray &active_corr) const
 define subset views for sampling modes
 
- Static Protected Member Functions inherited from Iterator
static void gnewton_set_recast (const Variables &recast_vars, const ActiveSet &recast_set, ActiveSet &sub_model_set)
 conversion of request vector values for the Gauss-Newton Hessian approximation More...
 
- Protected Attributes inherited from NonDSampling
int seedSpec
 the user seed specification (default is 0)
 
int randomSeed
 the current seed
 
const int samplesSpec
 initial specification of number of samples
 
int samplesRef
 reference number of samples updated for refinement
 
int numSamples
 the current number of samples to evaluate
 
String rngName
 name of the random number generator
 
unsigned short sampleType
 
 the sample type: default, random, lhs,

< incremental random, or incremental lhs

 
bool wilksFlag
 flags use of Wilks formula to calculate num samples
 
unsigned short wilksOrder
 
Real wilksAlpha
 
Real wilksBeta
 
short wilksSidedness
 
RealMatrix momentGrads
 gradients of standardized or central moments of response functions, as determined by finalMomentsType. Calculated in compute_moments() and indexed as (var,moment) when moment id runs from 1:2*numFunctions.
 
RealVector finalStatErrors
 standard errors (estimator std deviation) for each of the finalStatistics
 
int samplesIncrement
 current increment in a sequence of samples
 
Pecos::LHSDriver lhsDriver
 the C++ wrapper for the F90 LHS library
 
bool statsFlag
 flags computation/output of statistics
 
bool allDataFlag
 
 flags update of allResponses

< (allVariables or allSamples already defined)

 
short samplingVarsMode
 the sampling mode: ALEATORY_UNCERTAIN{,_UNIFORM}, EPISTEMIC_UNCERTAIN{,_UNIFORM}, UNCERTAIN{,_UNIFORM}, ACTIVE{,_UNIFORM}, or ALL{,_UNIFORM}. This is a secondary control on top of the variables view that allows sampling over subsets of variables that may differ from the view.
 
short sampleRanksMode
 mode for input/output of LHS sample ranks: IGNORE_RANKS, GET_RANKS, SET_RANKS, or SET_GET_RANKS
 
bool varyPattern
 flag for generating a sequence of seed values within multiple get_parameter_sets() calls so that these executions (e.g., for SBO/SBNLS) are not repeated, but are still repeatable
 
RealMatrix sampleRanks
 data structure to hold the sample ranks
 
SensAnalysisGlobal nonDSampCorr
 initialize statistical post processing
 
bool backfillFlag
 flags whether to use backfill to enforce uniqueness of discrete LHS samples
 
RealRealPairArray extremeValues
 Minimum and maximum values of response functions for epistemic calculations (calculated in compute_intervals()),.
 
bool functionMomentsComputed
 Function moments have been computed; used to determine whether to archive the moments.
 
- Static Protected Attributes inherited from NonD
static NonDnondInstance
 pointer to the active object instance used within static evaluator functions in order to avoid the need for static data
 

Detailed Description

Class for the Adaptive Importance Sampling methods within DAKOTA.

The NonDAdaptImpSampling implements the multi-modal adaptive importance sampling used for reliability calculations. (eventually we will want to broaden this). Need to add more detail to this description.

Constructor & Destructor Documentation

NonDAdaptImpSampling ( ProblemDescDB problem_db,
Model model 
)
NonDAdaptImpSampling ( Model model,
unsigned short  sample_type,
int  refine_samples,
int  refine_seed,
const String &  rng,
bool  vary_pattern,
unsigned short  is_type,
bool  cdf_flag,
bool  x_space_model,
bool  use_model_bounds,
bool  track_extreme 
)

alternate constructor for on-the-fly instantiations

This is an alternate constructor for instantiations on the fly using a Model but no ProblemDescDB. It will perform refinement for one response QOI and one probability level (passed in initialize()).

References Model::assign_rep(), NonD::cdfFlag, NonDSampling::extremeValues, NonD::finalMomentsType, Iterator::maxEvalConcurrency, Analyzer::numFunctions, NonDAdaptImpSampling::refineSamples, NonDAdaptImpSampling::trackExtremeValues, NonDAdaptImpSampling::useModelBounds, and NonDAdaptImpSampling::uSpaceModel.

Member Function Documentation

void initialize ( const RealVectorArray &  acv_points,
bool  x_space_data,
size_t  resp_index,
Real  initial_prob,
Real  failure_threshold 
)

initializes data needed for importance sampling: an initial set of points around which to sample, a failure threshold, an initial probability to refine, and flags to control transformations

Initializes data using a vector array of starting points.

References NonDAdaptImpSampling::designPoint, NonDAdaptImpSampling::failThresh, NonDAdaptImpSampling::initPointsU, NonDAdaptImpSampling::invertProb, NonD::numCAUV, Model::probability_transformation(), NonDAdaptImpSampling::probEstimate, NonDAdaptImpSampling::respFnIndex, NonD::startCAUV, and NonDAdaptImpSampling::uSpaceModel.

Referenced by NonDAdaptImpSampling::core_run().

void initialize ( const RealMatrix &  acv_points,
bool  x_space_data,
size_t  resp_index,
Real  initial_prob,
Real  failure_threshold 
)

initializes data needed for importance sampling: an initial set of points around which to sample, a failure threshold, an initial probability to refine, and flags to control transformations

Initializes data using a matrix of starting points.

References NonDAdaptImpSampling::designPoint, NonDAdaptImpSampling::failThresh, NonDAdaptImpSampling::initPointsU, NonDAdaptImpSampling::invertProb, NonD::numCAUV, Analyzer::numContinuousVars, Model::probability_transformation(), NonDAdaptImpSampling::probEstimate, NonDAdaptImpSampling::respFnIndex, NonD::startCAUV, and NonDAdaptImpSampling::uSpaceModel.

void initialize ( const RealVector &  acv_point,
bool  x_space_data,
size_t  resp_index,
Real  initial_prob,
Real  failure_threshold 
)

initializes data needed for importance sampling: an initial point around which to sample, a failure threshold, an initial probability to refine, and flags to control transformations

Initializes data using only one starting point.

References NonDAdaptImpSampling::designPoint, NonDAdaptImpSampling::failThresh, NonDAdaptImpSampling::initPointsU, NonDAdaptImpSampling::invertProb, NonD::numCAUV, Model::probability_transformation(), NonDAdaptImpSampling::probEstimate, NonDAdaptImpSampling::respFnIndex, NonD::startCAUV, and NonDAdaptImpSampling::uSpaceModel.


The documentation for this class was generated from the following files: