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NonDQUESOBayesCalibration Member List

This is the complete list of members for NonDQUESOBayesCalibration, including all inherited members.

acceptanceChainNonDBayesCalibrationprotected
acceptedFnValsNonDBayesCalibrationprotected
accepts_multiple_points() const Iteratorvirtual
active_set(const ActiveSet &set)Iteratorinline
active_set() const Iteratorinline
active_set_request_values(short asv_val)Iteratorinline
active_set_request_vector(const ShortArray &asv)Iteratorinline
active_set_request_vector() const Iteratorinline
activeSetIteratorprotected
adaptExpDesignNonDBayesCalibrationprotected
adaptPosteriorRefineNonDBayesCalibrationprotected
add_lhs_hifi_data()NonDBayesCalibrationprotected
advancedOptionsFileNonDQUESOBayesCalibrationprotected
algorithm_space_model() const NonDBayesCalibrationinlineprotectedvirtual
all_responses() const Analyzerinlinevirtual
all_samples()Analyzerinlinevirtual
all_variables()Analyzerinlinevirtual
allHeadersAnalyzerprotected
allResponsesAnalyzerprotected
allSamplesAnalyzerprotected
allVariablesAnalyzerprotected
Analyzer()Analyzerinlineprotected
Analyzer(ProblemDescDB &problem_db, Model &model)Analyzerprotected
Analyzer(unsigned short method_name, Model &model)Analyzerprotected
Analyzer(unsigned short method_name)Analyzerprotected
ann_dist(const ANNpointArray matrix1, const ANNpointArray matrix2, RealVector &distances, int NX, int NY, int dim2, IntVector &k, double eps) (defined in NonDBayesCalibration)NonDBayesCalibrationprotectedstatic
ann_dist(const ANNpointArray matrix1, const ANNpointArray matrix2, RealVector &distances, Int2DArray &indices, int NX, int NY, int dim2, IntVector &k, double eps) (defined in NonDBayesCalibration)NonDBayesCalibrationprotectedstatic
apply_error_vec(const RealVector &error_vec, int &seed, int experiment) (defined in NonDBayesCalibration)NonDBayesCalibrationprotected
apply_hifi_sim_error(int &random_seed, int num_exp, int exp_offset=0)NonDBayesCalibrationprotected
archive_allocate_mappings()NonDprotected
archive_allocate_pdf()NonDprotected
archive_equiv_hf_evals(const Real equiv_hf_evals)NonDprotected
archive_from_resp(size_t fn_index, size_t inc_id=0)NonDprotected
archive_model_response(const Response &, size_t idx) const Analyzerinlineprotectedvirtual
archive_model_variables(const Model &, size_t idx) const Analyzerinlineprotectedvirtual
archive_pdf(size_t fn_index, size_t inc_id=0)NonDprotected
archive_sobol_indices() const Analyzerprotected
archive_to_resp(size_t fn_index, size_t inc_id=0)NonDprotected
assess_emulator_convergence()NonDBayesCalibrationprotected
assign_rep(std::shared_ptr< Iterator > iterator_rep)Iterator
augment_gradient_with_log_prior(VectorType1 &log_grad, const VectorType2 &vec)NonDBayesCalibrationprotected
augment_hessian_with_log_prior(MatrixType &log_hess, const VectorType &vec)NonDBayesCalibrationprotected
batchEvalsNonDBayesCalibrationprotected
batchSizeNonDBayesCalibrationprotected
best_to_all()NonDBayesCalibrationprotected
bestResponseArrayIteratorprotected
bestSamplesNonDBayesCalibrationprotected
bestVariablesArrayIteratorprotected
bestVarsRespMapAnalyzerprotected
build_designs(VariablesArray &design_matrix)NonDBayesCalibrationprotected
build_error_matrix(const RealVector &sim_error_vec, RealMatrix &sim_error_matrix, int &seed)NonDBayesCalibrationprotected
build_field_discrepancy() (defined in NonDBayesCalibration)NonDBayesCalibrationprotected
build_GP_field(const RealMatrix &t, RealMatrix &t_pred, const RealVector &concat_disc, RealVector &disc_pred, RealVector &disc_var) (defined in NonDBayesCalibration)NonDBayesCalibrationprotected
build_hi2lo_xmatrix(RealMatrix &Xmatrix, int i, const RealMatrix &mi_chain, RealMatrix &sim_error_matrix)NonDBayesCalibrationprotected
build_model_discrepancy()NonDBayesCalibrationprotected
build_scalar_discrepancy() (defined in NonDBayesCalibration)NonDBayesCalibrationprotected
burnInSamplesNonDBayesCalibrationprotected
cache_chain()NonDQUESOBayesCalibrationprotected
calculate_evidence()NonDBayesCalibrationprotected
calculate_kde()NonDBayesCalibrationprotected
calibrate()NonDQUESOBayesCalibrationprotectedvirtual
calibrate_to_hifi()NonDBayesCalibrationprotected
calibrate_with_adaptive_emulator()NonDBayesCalibrationprotected
calibrationDataNonDCalibrationprotected
calIpMhOptionsValuesNonDQUESOBayesCalibrationprotected
calIpOptionsValuesNonDQUESOBayesCalibrationprotected
calModelDiscrepancyNonDBayesCalibrationprotected
calModelEvidenceNonDBayesCalibrationprotected
calModelEvidLaplaceNonDBayesCalibrationprotected
calModelEvidMCNonDBayesCalibrationprotected
cdfFlagNonDprotected
chainDiagnosticsNonDBayesCalibrationprotected
chainDiagnosticsCINonDBayesCalibrationprotected
chainSamplesNonDBayesCalibrationprotected
chainStats (defined in NonDBayesCalibration)NonDBayesCalibrationprotected
check_sub_iterator_conflict()Iteratorvirtual
choose_batch_from_mutual_info(int random_seed, int num_it, int max_hifi, int num_hifi, RealMatrix &mi_chain, VariablesArray &design_matrix, VariablesArray &optimal_config_matrix, RealVector &MI_vec)NonDBayesCalibrationprotected
compact_mode() const Analyzerinlineprotectedvirtual
compactModeAnalyzerprotected
compute_densities(const RealRealPairArray &min_max_fns, bool prob_refinement=false, bool all_levels_computed=false)NonDprotected
compute_intervals() (defined in NonDBayesCalibration)NonDBayesCalibrationprotected
compute_prediction_vals(RealMatrix &filtered_fn_vals, RealMatrix &PredVals, int num_filtered, size_t num_exp, size_t num_concatenated) (defined in NonDBayesCalibration)NonDBayesCalibrationprotected
compute_statistics()NonDBayesCalibrationprotectedvirtual
compute_vbd_stats(const size_t num_samples, const IntResponseMap &resp_samples)Analyzerprotected
computedGenRelLevelsNonDprotected
computedPDFAbscissasNonDprotected
computedPDFOrdinatesNonDprotected
computedProbLevelsNonDprotected
computedRelLevelsNonDprotected
computedRespLevelsNonDprotected
configLowerBndsNonDBayesCalibrationprotected
configUpperBndsNonDBayesCalibrationprotected
configure_cost(unsigned short num_steps, bool multilevel, RealVector &cost)NonDinlineprotected
configure_sequence(size_t &num_steps, size_t &secondary_index, short &seq_type)NonDprotected
construct_lhs(Iterator &u_space_sampler, Model &u_model, unsigned short sample_type, int num_samples, int seed, const String &rng, bool vary_pattern, short sampling_vars_mode=ACTIVE)NonDprotected
construct_map_model()NonDBayesCalibrationprotected
construct_map_optimizer()NonDBayesCalibrationprotected
construct_mcmc_model()NonDBayesCalibrationprotected
convergence_tolerance(Real conv_tol)Iteratorinline
convergence_tolerance() const Iteratorinline
convergenceTolIteratorprotected
copy_gsl(const QUESO::GslVector &qv, RealVector &rv)NonDQUESOBayesCalibrationprotected
copy_gsl(const RealVector &rv, QUESO::GslVector &qv)NonDQUESOBayesCalibrationprotected
copy_gsl(const QUESO::GslVector &qv, RealMatrix &rm, int i)NonDQUESOBayesCalibrationprotected
copy_gsl_partial(const QUESO::GslVector &qv, size_t start, RealVector &rv)NonDQUESOBayesCalibrationprotected
copy_gsl_partial(const RealVector &rv, QUESO::GslVector &qv, size_t start)NonDQUESOBayesCalibrationprotected
core_run()NonDBayesCalibrationprotectedvirtual
correctedFieldResponsesNonDBayesCalibrationprotected
correctedFieldVariancesNonDBayesCalibrationprotected
correctedResponsesNonDBayesCalibrationprotected
correctedVariancesNonDBayesCalibrationprotected
dakotaLogLikelihood(const QUESO::GslVector &paramValues, const QUESO::GslVector *paramDirection, const void *functionDataPtr, QUESO::GslVector *gradVector, QUESO::GslMatrix *hessianMatrix, QUESO::GslVector *hessianEffect)NonDQUESOBayesCalibrationprotectedstatic
declare_sources()Iteratorvirtual
derived_free_communicators(ParLevLIter pl_iter)NonDBayesCalibrationprotectedvirtual
derived_init_communicators(ParLevLIter pl_iter)NonDBayesCalibrationprotectedvirtual
derived_set_communicators(ParLevLIter pl_iter)NonDBayesCalibrationprotectedvirtual
DerivInformedPropCovLogitTK< QUESO::GslVector, QUESO::GslMatrix > classNonDQUESOBayesCalibrationfriend
DerivInformedPropCovTK< QUESO::GslVector, QUESO::GslMatrix > classNonDQUESOBayesCalibrationfriend
discrepancyFieldResponsesNonDBayesCalibrationprotected
discrepancyResponsesNonDBayesCalibrationprotected
discrepancyTypeNonDBayesCalibrationprotected
discrepPolyOrderNonDBayesCalibrationprotected
emulatorTypeNonDBayesCalibrationprotected
envOptionsValuesNonDQUESOBayesCalibrationprotected
epistemicStatsNonDprotected
equal_gsl(const QUESO::GslVector &qv1, const QUESO::GslVector &qv2)NonDQUESOBayesCalibrationprotected
estimate_partition_bounds()Iteratorvirtual
eval_hi2lo_stop(bool &stop_metric, double &prev_MI, const RealVector &MI_vec, int num_hifi, int max_hifi, int num_candidates)NonDBayesCalibrationprotected
eval_tag_prefix(const String &eval_id_str)Iteratorvirtual
evaluate_parameter_sets(Model &model, bool log_resp_flag, bool log_best_flag)Analyzerprotected
evaluationsDBIteratorprotected
evaluationsDBStateIteratorprotected
evidenceSamplesNonDBayesCalibrationprotected
expDataNonDCalibrationprotected
export_chain()NonDBayesCalibrationprotected
export_chain(RealMatrix &filtered_chain, RealMatrix &filtered_fn_vals)NonDBayesCalibrationprotected
export_discrepancy(RealMatrix &pred_config_mat)NonDBayesCalibrationprotected
export_field_discrepancy(RealMatrix &pred_vars_mat)NonDBayesCalibrationprotected
export_final_surrogates(Model &data_fit_surr_model)Iteratorprotected
export_posterior_samples_to_file(const std::string filename, const RealMatrix &posterior_data) const (defined in NonDBayesCalibration)NonDBayesCalibrationprotected
exportCorrModelFileNonDBayesCalibrationprotected
exportCorrModelFormatNonDBayesCalibrationprotected
exportCorrVarFileNonDBayesCalibrationprotected
exportCorrVarFormatNonDBayesCalibrationprotected
exportDiscrepFileNonDBayesCalibrationprotected
exportDiscrepFormatNonDBayesCalibrationprotected
exportMCMCFilenameNonDBayesCalibrationprotected
exportMCMCFormatNonDBayesCalibrationprotected
exportSurrogateIteratorprotected
extract_selected_posterior_samples(const std::vector< int > &points_to_keep, const RealMatrix &samples_for_posterior_eval, const RealVector &posterior_density, RealMatrix &posterior_data) const (defined in NonDBayesCalibration)NonDBayesCalibrationprotected
filter_chain(const RealMatrix &acceptance_chain, RealMatrix &filtered_chain, int target_length)NonDBayesCalibrationprotected
filter_chain(const RealMatrix &acceptance_chain, RealMatrix &filtered_chain)NonDBayesCalibrationprotected
filter_chain_by_conditioning() overrideNonDQUESOBayesCalibrationprotectedvirtual
filter_fnvals(const RealMatrix &accepted_fn_vals, RealMatrix &filtered_fn_vals) (defined in NonDBayesCalibration)NonDBayesCalibrationprotected
filter_matrix_cols(const RealMatrix &orig_matrix, int start_index, int stride, RealMatrix &filtered_matrix)NonDBayesCalibrationprotected
filteredFnValsNonDBayesCalibrationprotected
filteredMCMCFormat (defined in NonDBayesCalibration)NonDBayesCalibrationprotected
final_moments_type() const NonDinline
final_moments_type(short type)NonDinline
finalize_run()NonDinlineprotectedvirtual
finalMomentsTypeNonDprotected
finalStatisticsNonDprotected
fnStats (defined in NonDBayesCalibration)NonDBayesCalibrationprotected
free_communicators(ParLevLIter pl_iter)Iterator
get_parameter_sets(Model &model)Analyzerprotectedvirtual
get_parameter_sets(Model &model, const size_t num_samples, RealMatrix &design_matrix)Analyzerprotectedvirtual
get_positive_definite_covariance_from_hessian(const RealSymMatrix &hessian, const RealMatrix &prior_chol_fact, RealSymMatrix &covariance, short output_lev)NonDBayesCalibrationstatic
get_positive_definite_covariance_from_hessian(const RealSymMatrix &hessian, RealSymMatrix &covariance)NonDBayesCalibrationinlineprotected
get_vbd_parameter_sets(Model &model, size_t num_samples)Analyzerprotected
gnewton_set_recast(const Variables &recast_vars, const ActiveSet &recast_set, ActiveSet &sub_model_set)Iteratorprotectedstatic
hifiModelNonDBayesCalibrationprotected
hifiSamplerNonDBayesCalibrationprotected
importCandFormatNonDBayesCalibrationprotected
importCandPtsFileNonDBayesCalibrationprotected
importPredConfigFormatNonDBayesCalibrationprotected
importPredConfigsNonDBayesCalibrationprotected
inflate_final_samples(const Sizet2DArray &N_l_2D, bool multilev, size_t secondary_index, Sizet3DArray &N_l_3D)NonDprotected
init_bayesian_solver() override (defined in NonDQUESOBayesCalibration)NonDQUESOBayesCalibrationprotectedvirtual
init_communicators(ParLevLIter pl_iter)Iterator
init_hyper_parameters()NonDBayesCalibrationprotected
init_map_optimizer()NonDBayesCalibrationprotected
init_precond_request_value()NonDQUESOBayesCalibrationprotected
init_proposal_covariance() (defined in NonDQUESOBayesCalibration)NonDQUESOBayesCalibrationprotected
init_queso_environment()NonDQUESOBayesCalibrationprotected
initHifiSamplesNonDBayesCalibrationprotected
initial_point(const Variables &pt)Iteratorvirtual
initial_point(const RealVector &pt)Iteratorvirtual
initial_points(const VariablesArray &pts)Iteratorvirtual
initial_points() const Iteratorprotectedvirtual
initialize_final_statistics()NonDprotectedvirtual
initialize_graphics(int iterator_server_id=1)Iteratorvirtual
initialize_iterator(int job_index)Iteratorvirtual
initialize_level_mappings()NonDprotected
initialize_model()NonDBayesCalibrationprotected
initialize_model_graphics(Model &model, int iterator_server_id)Iteratorprotected
initialize_response_covariance()NonDprotectedvirtual
initialize_run()NonDinlineprotectedvirtual
inverseProbNonDQUESOBayesCalibrationprotected
invGammaAlphasNonDBayesCalibrationprotected
invGammaBetasNonDBayesCalibrationprotected
invGammaDistsNonDBayesCalibrationprotected
is_null() const Iteratorinline
iterated_model(const Model &model)Iteratorinline
iterated_model()Iteratorinline
iteratedModelIteratorprotected
Iterator(std::shared_ptr< TraitsBase > traits=std::shared_ptr< TraitsBase >(new TraitsBase()))Iterator
Iterator(ProblemDescDB &problem_db, std::shared_ptr< TraitsBase > traits=std::shared_ptr< TraitsBase >(new TraitsBase()))Iterator
Iterator(ProblemDescDB &problem_db, Model &model, std::shared_ptr< TraitsBase > traits=std::shared_ptr< TraitsBase >(new TraitsBase()))Iterator
Iterator(const String &method_string, Model &model, std::shared_ptr< TraitsBase > traits=std::shared_ptr< TraitsBase >(new TraitsBase()))Iterator
Iterator(const Iterator &iterator)Iterator
Iterator(BaseConstructor, ProblemDescDB &problem_db, std::shared_ptr< TraitsBase > traits=std::shared_ptr< TraitsBase >(new TraitsBase()))Iteratorprotected
Iterator(NoDBBaseConstructor, unsigned short method_name, Model &model, std::shared_ptr< TraitsBase > traits=std::shared_ptr< TraitsBase >(new TraitsBase()))Iteratorprotected
Iterator(NoDBBaseConstructor, unsigned short method_name, std::shared_ptr< TraitsBase > traits=std::shared_ptr< TraitsBase >(new TraitsBase()))Iteratorprotected
Iterator(NoDBBaseConstructor, Model &model, size_t max_iter, size_t max_eval, Real conv_tol, std::shared_ptr< TraitsBase > traits=std::shared_ptr< TraitsBase >(new TraitsBase()))Iteratorprotected
iterator_rep() const Iteratorinline
kl_est (defined in NonDBayesCalibration)NonDBayesCalibrationprotected
kl_post_prior(RealMatrix &acceptanceChain)NonDBayesCalibrationprotected
knn_kl_div(RealMatrix &distX_samples, RealMatrix &distY_samples, size_t dim) (defined in NonDBayesCalibration)NonDBayesCalibrationstatic
knn_mutual_info(RealMatrix &Xmatrix, int dimX, int dimY, unsigned short alg) (defined in NonDBayesCalibration)NonDBayesCalibrationstatic
likelihoodFunctionObj (defined in NonDQUESOBayesCalibration)NonDQUESOBayesCalibrationprotected
linear_constraints(const RealMatrix &lin_ineq_coeffs, const RealVector &lin_ineq_lb, const RealVector &lin_ineq_ub, const RealMatrix &lin_eq_coeffs, const RealVector &lin_eq_tgt)Iteratorvirtual
load_pilot_sample(const SizetArray &pilot_spec, size_t num_steps, SizetArray &delta_N_l)NonDprotected
load_pilot_sample(const SizetArray &pilot_spec, const Sizet3DArray &N_l, Sizet2DArray &delta_N_l)NonDprotected
log_best()NonDQUESOBayesCalibrationprotected
log_likelihood(const RealVector &residuals, const RealVector &hyper_params)NonDBayesCalibrationprotected
log_prior_density(const VectorType &vec)NonDBayesCalibration
log_prior_density(const RealVector &vec) (defined in NonDBayesCalibration)NonDBayesCalibrationinline
logitTransformNonDQUESOBayesCalibrationprotected
map_pre_solve() override (defined in NonDQUESOBayesCalibration)NonDQUESOBayesCalibrationprotectedvirtual
mapOptAlgOverrideNonDBayesCalibrationprotected
mapOptimizerNonDBayesCalibrationprotected
mapSolnNonDBayesCalibrationprotected
maxEvalConcurrencyIteratorprotected
maxFunctionEvalsIteratorprotected
maxHifiEvalsNonDBayesCalibrationprotected
maximum_evaluation_concurrency() const Iteratorinline
maximum_evaluation_concurrency(int max_conc)Iteratorinline
maximum_iterations() const Iteratorinline
maximum_iterations(size_t max_iter)Iteratorinline
maxIterationsIteratorprotected
mcmcDerivOrderNonDBayesCalibrationprotected
mcmcModelNonDBayesCalibrationprotected
mcmcModelHasSurrogateNonDBayesCalibrationprotected
mcmcTypeNonDQUESOBayesCalibrationprotected
method_enum_to_string(unsigned short method_enum) const Iterator
method_id() const Iteratorinline
method_name(unsigned short m_name)Iteratorinline
method_name() const Iteratorinline
method_recourse()Iteratorvirtual
method_string(const String &m_str)Iteratorinline
method_string() const Iteratorinline
method_string_to_enum(const String &method_str) const Iterator
methodNameIteratorprotected
methodPCIterIteratorprotected
methodTraitsIteratorprotected
miPLIndexNonDprotected
momentStatsNonDprotected
mutual_info_buildX() (defined in NonDBayesCalibration)NonDBayesCalibrationprotected
mutualInfoAlgNonDBayesCalibrationprotected
myModelLayersIteratorprotected
neg_log_post_resp_mapping(const Variables &model_vars, const Variables &nlpost_vars, const Response &model_resp, Response &nlpost_resp)NonDBayesCalibrationprotectedstatic
negLogPostModelNonDBayesCalibrationprotected
nested_response_mappings(const RealMatrix &primary_coeffs, const RealMatrix &secondary_coeffs)Iteratorvirtual
nested_variable_mappings(const SizetArray &c_index1, const SizetArray &di_index1, const SizetArray &ds_index1, const SizetArray &dr_index1, const ShortArray &c_target2, const ShortArray &di_target2, const ShortArray &ds_target2, const ShortArray &dr_target2)Iteratorvirtual
NonD(ProblemDescDB &problem_db, Model &model)NonDprotected
NonD(unsigned short method_name, Model &model)NonDprotected
NonD(unsigned short method_name, const RealVector &lower_bnds, const RealVector &upper_bnds)NonDprotected
NonDBayesCalibration(ProblemDescDB &problem_db, Model &model)NonDBayesCalibration
nonDBayesInstanceNonDBayesCalibrationprotectedstatic
NonDCalibration(ProblemDescDB &problem_db, Model &model)NonDCalibration
nondInstanceNonDprotectedstatic
NonDQUESOBayesCalibration(ProblemDescDB &problem_db, Model &model)NonDQUESOBayesCalibration
nonDQUESOInstanceNonDQUESOBayesCalibrationprotectedstatic
nonlinear_constraints(const RealVector &nln_ineq_lb, const RealVector &nln_ineq_ub, const RealVector &nln_eq_tgt)Iteratorvirtual
num_final_solutions() const Iteratorinline
num_final_solutions(size_t num_final)Iteratorinline
num_samples() const Analyzerinlinevirtual
numCandidatesNonDBayesCalibrationprotected
numCAUVNonDprotected
numContinuousVarsAnalyzerprotected
numDiscreteIntVarsAnalyzerprotected
numDiscreteRealVarsAnalyzerprotected
numDiscreteStringVarsAnalyzerprotected
numFinalSolutionsIteratorprotected
numFunctionsAnalyzerprotected
numHyperparamsNonDBayesCalibrationprotected
numLSqTermsAnalyzerprotected
numObjFnsAnalyzerprotected
numPredConfigsNonDBayesCalibrationprotected
obsErrorMultiplierModeNonDBayesCalibrationprotected
one_sided_delta(Real current, Real target)NonDinlineprotected
one_sided_delta(const SizetArray &current, const RealVector &targets, size_t power)NonDinlineprotected
one_sided_delta(const SizetArray &current, Real target, size_t power)NonDinlineprotected
operator=(const Iterator &iterator)Iterator
output_level(short out_lev)Iteratorinline
output_level() const Iteratorinline
outputLevelIteratorprotected
pack_parameters_buffer(MPIPackBuffer &send_buffer, int job_index)Iteratorvirtual
pack_results_buffer(MPIPackBuffer &send_buffer, int job_index)Iteratorvirtual
parallel_configuration_iterator(ParConfigLIter pc_iter)Iteratorinline
parallel_configuration_iterator() const Iteratorinline
parallel_configuration_iterator_map(std::map< size_t, ParConfigLIter > pci_map)Iteratorinline
parallel_configuration_iterator_map() const Iteratorinline
parallel_library() const Iteratorinline
parallelLibIteratorprotected
paramDomainNonDQUESOBayesCalibrationprotected
paramInitialsNonDQUESOBayesCalibrationprotected
paramSpaceNonDQUESOBayesCalibrationprotected
pdf_output() const NonDinline
pdf_output(bool output)NonDinline
pdfComputedNonDprotected
pdfOutputNonDprotected
post_input()Iteratorvirtual
post_run(std::ostream &s)Analyzerprotectedvirtual
posteriorStatsKDENonDBayesCalibrationprotected
posteriorStatsKLNonDBayesCalibrationprotected
posteriorStatsMutualNonDBayesCalibrationprotected
postRvNonDQUESOBayesCalibrationprotected
pre_output()Analyzerprotectedvirtual
pre_run()NonDBayesCalibrationprotectedvirtual
precondition_proposal(unsigned int chain_index)NonDQUESOBayesCalibrationprotected
precondRequestValueNonDQUESOBayesCalibrationprotected
predictionConfigListNonDBayesCalibrationprotected
predValsNonDBayesCalibrationprotected
prevCoeffsNonDBayesCalibrationprotected
prevNondInstanceNonDprotected
print_batch_means_intervals(std::ostream &s) (defined in NonDBayesCalibration)NonDBayesCalibrationprotected
print_chain_diagnostics(std::ostream &s) (defined in NonDBayesCalibration)NonDBayesCalibrationprotected
print_densities(std::ostream &s) const NonDinlineprotected
print_densities(std::ostream &s, String qoi_type, const StringArray &pdf_labels) const NonDprotected
print_hi2lo_batch_status(int num_it, int batch_n, int batchEvals, const Variables &optimal_config, double max_MI) (defined in NonDBayesCalibration)NonDBayesCalibrationprotected
print_hi2lo_begin(int num_it)NonDBayesCalibrationprotected
print_hi2lo_chain_moments() (defined in NonDBayesCalibration)NonDBayesCalibrationprotected
print_hi2lo_file(std::ostream &out_file, int num_it, const VariablesArray &optimal_config_matrix, const RealVector &MI_vec, RealMatrix &resp_matrix)NonDBayesCalibrationprotected
print_hi2lo_selected(int num_it, const VariablesArray &optimal_config_matrix, const RealVector &MI_vec) (defined in NonDBayesCalibration)NonDBayesCalibrationprotected
print_hi2lo_status(int num_it, int i, const Variables &xi_i, double MI) (defined in NonDBayesCalibration)NonDBayesCalibrationprotected
print_intervals_file(std::ostream &stream, RealMatrix &functionvalsT, RealMatrix &predvalsT, int length, size_t aug_length) (defined in NonDBayesCalibration)NonDBayesCalibrationprotected
print_intervals_screen(std::ostream &stream, RealMatrix &functionvalsT, RealMatrix &predvalsT, int length) (defined in NonDBayesCalibration)NonDBayesCalibrationprotected
print_kl(std::ostream &stream) (defined in NonDBayesCalibration)NonDBayesCalibrationprotected
print_level_mappings(std::ostream &s) const NonDinline
print_level_mappings(std::ostream &s, String qoi_type, const StringArray &qoi_labels) const NonD
print_level_mappings(std::ostream &s, const RealVector &level_maps, bool moment_offset, const String &prepend="")NonD
print_multilevel_evaluation_summary(std::ostream &s, const SizetArray &N_samp)NonDprotected
print_multilevel_evaluation_summary(std::ostream &s, const Sizet2DArray &N_samp)NonDprotected
print_multilevel_evaluation_summary(std::ostream &s, const Sizet3DArray &N_samp, String type="Final")NonDprotected
print_results(std::ostream &s, short results_state=FINAL_RESULTS) overrideNonDQUESOBayesCalibrationprotectedvirtual
print_sobol_indices(std::ostream &s) const Analyzerprotected
print_system_mappings(std::ostream &s) const NonDprotected
print_variables(std::ostream &s, const RealVector &c_vars)NonDBayesCalibrationprotected
prior_cholesky_factorization()NonDBayesCalibrationprotected
prior_density(const VectorType &vec)NonDBayesCalibration
prior_density(const RealVector &vec) (defined in NonDBayesCalibration)NonDBayesCalibrationinline
prior_mean(VectorType &mean_vec) const NonDBayesCalibration
prior_proposal_covariance()NonDQUESOBayesCalibrationprotected
prior_sample(Engine &rng, RealVector &prior_samples)NonDBayesCalibration
prior_sample_matrix(RealMatrix &prior_dist_samples) (defined in NonDBayesCalibration)NonDBayesCalibrationprotected
prior_variance(MatrixType &var_mat) const NonDBayesCalibration
priorCovCholFactorNonDBayesCalibrationprotected
priorPropCovMultNonDQUESOBayesCalibrationprotected
priorRvNonDQUESOBayesCalibrationprotected
probDescDBIteratorprotected
problem_description_db() const Iteratorinline
propCovUpdatePeriodNonDQUESOBayesCalibrationprotected
proposalCovarDataNonDBayesCalibrationprotected
proposalCovarFilenameNonDBayesCalibrationprotected
proposalCovarInputTypeNonDBayesCalibrationprotected
proposalCovarTypeNonDBayesCalibrationprotected
proposalCovMatrixNonDQUESOBayesCalibrationprotected
pull_level_mappings(RealVector &level_maps, size_t offset)NonDprotected
push_level_mappings(const RealVector &level_maps, size_t offset)NonDprotected
query_cost(unsigned short num_steps, bool multilevel, RealVector &cost)NonDprotected
query_cost(unsigned short num_steps, Model &model, RealVector &cost)NonDprotected
quesoEnvNonDQUESOBayesCalibrationprotected
random_seed(int seed)Iteratorvirtual
randomSeedNonDBayesCalibrationprotected
read_variables_responses(int num_evals, size_t num_vars)Analyzerprotected
readFieldCoordsNonDBayesCalibrationprotected
requested_levels(const RealVectorArray &req_resp_levels, const RealVectorArray &req_prob_levels, const RealVectorArray &req_rel_levels, const RealVectorArray &req_gen_rel_levels, short resp_lev_tgt, short resp_lev_tgt_reduce, bool cdf_flag, bool pdf_output)NonD
requestedGenRelLevelsNonDprotected
requestedProbLevelsNonDprotected
requestedRelLevelsNonDprotected
requestedRespLevelsNonDprotected
reset()Iteratorvirtual
residualModelNonDBayesCalibrationprotected
resize()NonDCalibrationvirtual
resize_communicators(ParLevLIter pl_iter, bool reinit_comms)Iterator
resize_final_statistics_gradients()NonDprotected
respLevelTargetNonDprotected
respLevelTargetReduceNonDprotected
response_array_results()Analyzerinlineprotectedvirtual
response_error_estimates() const Iteratorvirtual
response_results() const NonDinlineprotectedvirtual
response_results_active_set(const ActiveSet &set)NonDinlineprotectedvirtual
resultsDBIteratorprotected
resultsNamesIteratorprotected
returns_multiple_points() const Analyzerinlineprotectedvirtual
run(ParLevLIter pl_iter)Iterator
run()Iterator
run_chain()NonDQUESOBayesCalibrationprotected
run_hifi(const VariablesArray &optimal_config_matrix, RealMatrix &resp_matrix)NonDBayesCalibrationprotected
run_identifier() const Iteratorprotected
run_queso_solver()NonDQUESOBayesCalibrationprotected
sample_to_variables(const Real *sample_vars, Variables &vars)Analyzerprotectedvirtual
samples_to_variables_array(const RealMatrix &sample_matrix, VariablesArray &vars_array)Analyzerprotected
sampling_increment()Iteratorvirtual
sampling_reference(size_t samples_ref)Iteratorvirtual
sampling_reset(size_t min_samples, bool all_data_flag, bool stats_flag)Iteratorvirtual
sampling_scheme() const Iteratorvirtual
scalarDataFilename (defined in NonDBayesCalibration)NonDBayesCalibrationprotected
scale_model()NonDBayesCalibrationprotected
scaleFlagNonDBayesCalibrationprotected
set_communicators(ParLevLIter pl_iter)Iterator
set_ip_options()NonDQUESOBayesCalibrationprotected
set_mh_options()NonDQUESOBayesCalibrationprotected
specify_likelihood() override (defined in NonDQUESOBayesCalibration)NonDQUESOBayesCalibrationprotectedvirtual
specify_posterior() override (defined in NonDQUESOBayesCalibration)NonDQUESOBayesCalibrationprotectedvirtual
specify_prior() overrideNonDQUESOBayesCalibrationprotectedvirtual
standardizedSpaceNonDBayesCalibrationprotected
startCAUVNonDprotected
stochExpIteratorNonDBayesCalibrationprotected
sub_iterator_flag(bool si_flag)Iterator
sub_optimizer_select(unsigned short requested_sub_method, unsigned short default_sub_method=SUBMETHOD_NPSOL)NonDprotected
subIteratorFlagIteratorprotected
submethod_enum_to_string(unsigned short submethod_enum) const Iterator
subSamplingPeriodNonDBayesCalibrationprotected
summary_output(bool summary_output_flag)Iteratorinline
summaryOutputFlagIteratorprotected
surrExportFormatIteratorprotected
surrExportPrefixIteratorprotected
top_level()Iterator
top_level(bool tflag)Iterator
topLevelIteratorprotected
totalLevelRequestsNonDprotected
traits() const Iteratorinline
unpack_parameters_buffer(MPIUnpackBuffer &recv_buffer, int job_index)Iteratorvirtual
unpack_parameters_initialize(MPIUnpackBuffer &recv_buffer, int job_index)Iteratorvirtual
unpack_results_buffer(MPIUnpackBuffer &recv_buffer, int job_index)Iteratorvirtual
update_aleatory_final_statistics()NonDprotected
update_chain_size(unsigned int size)NonDQUESOBayesCalibrationprotected
update_final_statistics()NonDprotectedvirtual
update_from_model(const Model &model)Analyzerprotectedvirtual
update_local_results(int job_index)Iteratorvirtual
update_model()NonDBayesCalibrationprotected
update_model_from_sample(Model &model, const Real *sample_vars)Analyzerprotectedvirtual
update_model_from_variables(Model &model, const Variables &vars)Analyzerprotectedvirtual
update_system_final_statistics()NonDprotected
update_system_final_statistics_gradients()NonDprotected
user_proposal_covariance(const String &input_fmt, const RealVector &cov_data, const String &cov_filename)NonDQUESOBayesCalibrationprotected
uses_method() const Iteratorvirtual
valid_cost_values(const RealVector &cost)NonDprotected
validate_proposal() (defined in NonDQUESOBayesCalibration)NonDQUESOBayesCalibrationprotected
variable_bounds(const RealVector &cv_lower_bnds, const RealVector &cv_upper_bnds)Iteratorvirtual
variables_array_results()Analyzerinlineprotectedvirtual
variables_array_to_samples(const VariablesArray &vars_array, RealMatrix &sample_matrix)Analyzerprotected
variables_results() const Analyzerinlineprotectedvirtual
variables_to_sample(const Variables &vars, Real *sample_c_vars)Analyzerprotectedvirtual
vary_pattern(bool pattern_flag)Analyzervirtual
weight_model()NonDBayesCalibrationprotected
weightFlagNonDBayesCalibrationprotected
~Analyzer()Analyzerinlineprotected
~Iterator()Iteratorvirtual
~NonD()NonDinlineprotected
~NonDBayesCalibration()NonDBayesCalibration
~NonDCalibration()NonDCalibration
~NonDQUESOBayesCalibration()NonDQUESOBayesCalibration